miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Lumbricus rubellus



ABOUT THIS RECORD

ID: MNEST009599
species: Lumbricus rubellus
miRNA family: mir-297
source: miRNEST

Taxonomy by NCBI:
Lumbricus rubellus Lumbricus Lumbricidae Lumbricina Haplotaxida Oligochaeta Clitellata Annelida Annelida/Echiura/Pogonophora group Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ATGTATGTGTGTATGTAGGCC

miRNA*
TCTGCGTACATGTATGTTT

mismatches: 1
bulges: 2

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pre-miRNA
GCCAAAGTTACAGTTTAGATCTGCGTACATGTATGTTTATGTATGTATGTATACTATGTATGTATACTATGTATGTGCGTGTATGTATGTGTGTATGTAG
GCC
TATCACTGTGGCTATG


dot-bracket secondary structure
..((.(((((((((.(((.(((((((((((((((((.(((((((((((((((((.......))))))...))))))))))).))))))..))))))))))
).)
))..))))))))).))



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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